Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 34VL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1594178 bp
Thymine Count
1584054 bp
Guanine Count
1513332 bp
Cytosine Count
1521202 bp
Genome Length
6212766 bp
Protein-coding Genes
6911 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | B1K96_37030 | Not Available | Positive | 6048966 - 6049324 | 12485.8 |
| signal peptidase | B1K96_37040 | Not Available | Positive | 6049937 - 6050150 | 8198.9 |
| hypothetical protein | B1K96_37045 | Not Available | Positive | 6050304 - 6050536 | 8978.75 |
| hypothetical protein | B1K96_37050 | Not Available | Negative | 6050537 - 6050758 | 8371.22 |
| haloacid dehalogenase | B1K96_37065 | Not Available | Positive | 6051633 - 6052008 | 13861.7 |
| udp-glucose 4-epimerase | B1K96_37070 | Not Available | Negative | 6052009 - 6052306 | 11407.7 |
| aspartate kinase | B1K96_37075 | Not Available | Positive | 6052307 - 6052584 | 10333.1 |
| 30s ribosomal protein s6 | B1K96_37080 | Not Available | Positive | 6052585 - 6052694 | 3902.64 |
| single-stranded dna-binding protein | B1K96_37085 | Not Available | Positive | 6052738 - 6053083 | 12972.2 |
| hypothetical protein | B1K96_37090 | Not Available | Positive | 6053345 - 6053560 | 8476.31 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





