Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 34VL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1594178 bp
Thymine Count
1584054 bp
Guanine Count
1513332 bp
Cytosine Count
1521202 bp
Genome Length
6212766 bp
Protein-coding Genes
6911 genes
Non-Coding Genes
545 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | B1K96_36970 | Not Available | Positive | 6045255 - 6045405 | 5669.58 |
| sialic acid utilization regulator, rpir family protein | B1K96_36975 | Not Available | Negative | 6045555 - 6045801 | 9260.39 |
| two-component sensor histidine kinase | B1K96_36980 | Not Available | Negative | 6045802 - 6046096 | 11134.5 |
| seca cross-linking domain protein | B1K96_36985 | Not Available | Positive | 6046097 - 6046388 | 11019.9 |
| prevent-host-death protein | B1K96_36990 | Not Available | Positive | 6046389 - 6046520 | 5040.73 |
| two-component sensor histidine kinase | B1K96_37000 | Not Available | Positive | 6046714 - 6047266 | 21427.2 |
| histidine--trna ligase | B1K96_37005 | Not Available | Negative | 6047267 - 6047716 | 17161.3 |
| transcriptional regulator | B1K96_37015 | Not Available | Negative | 6048005 - 6048190 | 7256.71 |
| abc transporter permease | B1K96_37020 | Not Available | Positive | 6048327 - 6048611 | 10846.5 |
| mfs transporter | B1K96_37025 | Not Available | Negative | 6048612 - 6048965 | 12388.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





