Rhizobium leguminosarum bv. trifolii strain CCGM5

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum bv. trifolii strain CCGM5 is a gram-negative, mesophilic bacterium that inhabits soil environments. This organism has a rod shape and exhibits mobility due to the presence of flagella. As a chemoheterotroph, R. leguminosarum bv. trifolii strain CCGM5 utilizes organic compounds as its energy source, thriving in aerobic conditions. This strain is notable for its symbiotic relationships with a variety of host plants, including Lens culinaris, Trifolium ambiguum, Vavilovia formosa, Medicago sativa, Lathyrus oleraceus, Trifolium pratense, Trifolium rubens, and Trifolium repens. Such associations are crucial for nitrogen fixation, which benefits both the bacteria and the host plants by enhancing nitrogen availability in the soil. R. leguminosarum bv. trifolii strain CCGM5 is characterized by a single replicon and two membranes, typical of gram-negative bacteria. Its nonsporulating nature indicates that it does not form spores to survive adverse conditions, relying instead on its symbiotic relationships and adaptation to its soil habitat for persistence. Understanding the ecological role of R. leguminosarum bv. trifolii strain CCGM5 can provide insights into sustainable agricultural practices, particularly in promoting nitrogen-fixing crops that improve soil fertility and reduce the need for chemical fertilizers. This contributes to more sustainable farming systems and enhances overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainbv. trifolii strain CCGM5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum bv. trifolii strain CCGM5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Phaseolus vulgaris, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum bv. trifolii strain CCGM5

Gene Summary

Adenine Count

1337494 bp

Thymine Count

1330073 bp

Guanine Count

2102067 bp

Cytosine Count

2143412 bp

Genome Length

6913046 bp

Protein-coding Genes

6270 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb1B5K10_25655Not AvailablePositive5268869 - 526952823455.7
hypothetical proteinB5K10_25680Not AvailablePositive5271639 - 527194111145.5
hypothetical proteinB5K10_25685Not AvailablePositive5271934 - 527223310993.1
hypothetical proteinB5K10_25695Not AvailableNegative5273968 - 52741958555.43
hypothetical proteinB5K10_25700Not AvailableNegative5274230 - 52744908823.71
gdp-fucose synthetaseB5K10_25705Not AvailableNegative5274941 - 527601139069.8
gdp-mannose 4,6-dehydrataseB5K10_25710Not AvailableNegative5276004 - 527709540975.7
exopolysaccharide biosynthesis proteinB5K10_25715Not AvailableNegative5277151 - 527936181183.7
glycosyl transferaseB5K10_25720Not AvailableNegative5279358 - 528050041001.8
glycosyl transferaseB5K10_25725Not AvailableNegative5280494 - 528159440671.2

Displaying genes 4911 – 4920 of 6376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.