Candidatus Lumbricidophila eiseniae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Candidatus Lumbricidiphila

Description

Candidatus Lumbricidophila eiseniae is a notable microorganism characterized by its single replicon structure, which indicates a streamlined genomic organization. The organism is cataloged under the accession number NAEP00000000.1, providing a reference point for further studies and analyses. As a member of the microbial community, Candidatus Lumbricidophila eiseniae may play a role in the soil ecosystem, particularly in association with earthworms. The relationship between microorganisms like Candidatus Lumbricidophila eiseniae and soil fauna is significant, as these interactions can influence nutrient cycling, organic matter decomposition, and overall soil health. Understanding the traits of Candidatus Lumbricidophila eiseniae can enhance our knowledge of soil microbiomes and their contributions to ecological processes. The organism's single replicon structure suggests it might have a specific ecological niche, potentially impacting its symbiotic relationships and functional roles within the soil environment. Therefore, studying Candidatus Lumbricidophila eiseniae could provide valuable insights into microbial diversity and the ecological dynamics of soil systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCandidatus Lumbricidiphila
SpeciesCandidatus Lumbricidiphila eiseniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Lumbricidophila eiseniae isolate EaCA-K 33, whole

Gene Summary

Adenine Count

560659 bp

Thymine Count

566575 bp

Guanine Count

865850 bp

Cytosine Count

854689 bp

Genome Length

2847834 bp

Protein-coding Genes

2503 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenaseB5766_04560Not AvailableNegative958451 - 95889416055.0
succinate dehydrogenase, cytochrome b556 subunitB5766_04565Not AvailableNegative958904 - 95932615793.5
mannose-1-phosphate guanylyltransferaseB5766_04570Not AvailablePositive959516 - 96064039408.0
bmp family abc transporter substrate-binding proteinB5766_04575Not AvailablePositive960929 - 96200836453.2
heme abc transporter atp-binding proteinB5766_04580Not AvailablePositive962215 - 96373254375.8
abc transporter permeaseB5766_04585Not AvailablePositive963750 - 96495542100.2
abc transporter permeaseB5766_04590Not AvailablePositive964952 - 96624144789.4
cytidine deaminaseB5766_04595Not AvailablePositive966228 - 96675518065.1
thymidine phosphorylaseB5766_04600Not AvailablePositive966752 - 96805945982.2
adenosine deaminaseB5766_04605Not AvailablePositive968167 - 96928541270.7

Displaying genes 901 – 910 of 2569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.