Candidatus Lumbricidophila eiseniae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Candidatus Lumbricidiphila

Description

Candidatus Lumbricidophila eiseniae is a notable microorganism characterized by its single replicon structure, which indicates a streamlined genomic organization. The organism is cataloged under the accession number NAEP00000000.1, providing a reference point for further studies and analyses. As a member of the microbial community, Candidatus Lumbricidophila eiseniae may play a role in the soil ecosystem, particularly in association with earthworms. The relationship between microorganisms like Candidatus Lumbricidophila eiseniae and soil fauna is significant, as these interactions can influence nutrient cycling, organic matter decomposition, and overall soil health. Understanding the traits of Candidatus Lumbricidophila eiseniae can enhance our knowledge of soil microbiomes and their contributions to ecological processes. The organism's single replicon structure suggests it might have a specific ecological niche, potentially impacting its symbiotic relationships and functional roles within the soil environment. Therefore, studying Candidatus Lumbricidophila eiseniae could provide valuable insights into microbial diversity and the ecological dynamics of soil systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCandidatus Lumbricidiphila
SpeciesCandidatus Lumbricidiphila eiseniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Lumbricidophila eiseniae isolate EaCA-K 33, whole

Gene Summary

Adenine Count

560659 bp

Thymine Count

566575 bp

Guanine Count

865850 bp

Cytosine Count

854689 bp

Genome Length

2847834 bp

Protein-coding Genes

2503 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter permease subunit pstcB5766_04460Not AvailableNegative938540 - 93948733602.1
phosphate abc transporter substrate-binding protein pstsB5766_04465Not AvailableNegative939638 - 94074436564.7
xre family transcriptional regulatorB5766_04470Not AvailableNegative940953 - 94238952824.5
phosphoenolpyruvate carboxykinase (gtp)B5766_04475Not AvailablePositive942541 - 94448170396.4
hypothetical proteinB5766_04480Not AvailablePositive944677 - 94513815617.6
6,7-dimethyl-8-ribityllumazine synthaseB5766_04485Not AvailableNegative945190 - 94565715394.5
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiB5766_04490Not AvailableNegative945654 - 94699447783.0
riboflavin synthaseB5766_04495Not AvailableNegative946991 - 94762021693.9
riboflavin biosynthesis protein ribdB5766_04500Not AvailableNegative947622 - 94866836174.2
tryptophan--trna ligaseB5766_04505Not AvailableNegative948991 - 94999836570.7

Displaying genes 881 – 890 of 2569 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.