Phyllobacterium zundukense strain Tri-38

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium zundukense strain Tri-38 is a Gram-negative bacterium characterized by its rod shape. This strain features a single replicon, indicating a relatively streamlined genomic structure. The accession number for this strain is MZMT00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the Phyllobacterium genus, strain Tri-38 is likely associated with various ecological niches, particularly in soil and plant-associated environments. Members of this genus are known for their potential role in nitrogen fixation and plant growth promotion, although specific functions of strain Tri-38 are not detailed in the provided data. The unicellular structure and Gram-negative nature suggest that this strain may possess a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of Gram-negative bacteria. This structural feature can influence the bacterium's interactions with its environment, including its ability to form biofilms or its susceptibility to antibiotics. In summary, Phyllobacterium zundukense strain Tri-38 represents a specific lineage within the broader context of beneficial soil bacteria. Its rod shape and Gram-negative classification may facilitate its ecological roles, potentially contributing to soil health and plant interactions, although further studies would be necessary to elucidate its precise ecological functions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium zundukense
Strainstrain Tri-38

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium zundukense strain Tri-38 NODE_11, whole genome

Gene Summary

Adenine Count

1275259 bp

Thymine Count

1270926 bp

Guanine Count

1703476 bp

Cytosine Count

1704399 bp

Genome Length

5954060 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseB5P45_16355Not AvailableNegative3298422 - 329928231906.9
sugar abc transporter permeaseB5P45_16360Not AvailableNegative3299363 - 330048141341.6
sugar abc transporter substrate-binding proteinB5P45_16365Not AvailableNegative3300597 - 330225860245.6
sugar abc transporter atp-binding proteinB5P45_16370Not AvailableNegative3302344 - 330340538806.1
fucose-binding proteinB5P45_16375Not AvailablePositive3303767 - 330420716090.7
hypothetical proteinB5P45_16380Not AvailablePositive3304544 - 33047266469.65
trna dihydrouridine(20/20a) synthase dusaB5P45_16385Not AvailablePositive3305226 - 330624237021.1
aspartic proteaseB5P45_16390Not AvailableNegative3306239 - 330694324948.3
duf1289 domain-containing proteinB5P45_16395Not AvailableNegative3306950 - 33071838899.86
adenosylcobinamide-gdp ribazoletransferaseB5P45_16400Not AvailableNegative3307202 - 330810431574.9

Displaying genes 3171 – 3180 of 5666 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.