Phyllobacterium zundukense strain Tri-38

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium zundukense strain Tri-38 is a Gram-negative bacterium characterized by its rod shape. This strain features a single replicon, indicating a relatively streamlined genomic structure. The accession number for this strain is MZMT00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the Phyllobacterium genus, strain Tri-38 is likely associated with various ecological niches, particularly in soil and plant-associated environments. Members of this genus are known for their potential role in nitrogen fixation and plant growth promotion, although specific functions of strain Tri-38 are not detailed in the provided data. The unicellular structure and Gram-negative nature suggest that this strain may possess a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of Gram-negative bacteria. This structural feature can influence the bacterium's interactions with its environment, including its ability to form biofilms or its susceptibility to antibiotics. In summary, Phyllobacterium zundukense strain Tri-38 represents a specific lineage within the broader context of beneficial soil bacteria. Its rod shape and Gram-negative classification may facilitate its ecological roles, potentially contributing to soil health and plant interactions, although further studies would be necessary to elucidate its precise ecological functions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium zundukense
Strainstrain Tri-38

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium zundukense strain Tri-38 NODE_11, whole genome

Gene Summary

Adenine Count

1275259 bp

Thymine Count

1270926 bp

Guanine Count

1703476 bp

Cytosine Count

1704399 bp

Genome Length

5954060 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis protein gumnB5P45_15240Not AvailableNegative3071527 - 307259438739.3
recombinase xercB5P45_15245Not AvailableNegative3072666 - 307362234961.4
ribosome maturation factor rimmB5P45_15250Not AvailablePositive3073747 - 307432820926.9
trna (guanosine(37)-n1)-methyltransferase trmdB5P45_15255Not AvailablePositive3074325 - 307503525809.9
50s ribosomal protein l19B5P45_15260Not AvailablePositive3075241 - 307569316606.2
basic amino acid abc transporter substrate-binding proteinB5P45_15265Not AvailablePositive3075865 - 307665928699.2
amino acid abc transporterB5P45_15270Not AvailablePositive3076668 - 307749230421.9
3-isopropylmalate dehydratase large subunitB5P45_15275Not AvailablePositive3077664 - 307907350849.6
nadph-dependent 7-cyano-7-deazaguanine reductase quefB5P45_15280Not AvailableNegative3079135 - 307959316820.1
6-carboxytetrahydropterin synthase quedB5P45_15285Not AvailableNegative3079590 - 307997614494.1

Displaying genes 2951 – 2960 of 5666 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.