Phyllobacterium zundukense strain Tri-38

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium zundukense strain Tri-38 is a Gram-negative bacterium characterized by its rod shape. This strain features a single replicon, indicating a relatively streamlined genomic structure. The accession number for this strain is MZMT00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the Phyllobacterium genus, strain Tri-38 is likely associated with various ecological niches, particularly in soil and plant-associated environments. Members of this genus are known for their potential role in nitrogen fixation and plant growth promotion, although specific functions of strain Tri-38 are not detailed in the provided data. The unicellular structure and Gram-negative nature suggest that this strain may possess a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of Gram-negative bacteria. This structural feature can influence the bacterium's interactions with its environment, including its ability to form biofilms or its susceptibility to antibiotics. In summary, Phyllobacterium zundukense strain Tri-38 represents a specific lineage within the broader context of beneficial soil bacteria. Its rod shape and Gram-negative classification may facilitate its ecological roles, potentially contributing to soil health and plant interactions, although further studies would be necessary to elucidate its precise ecological functions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium zundukense
Strainstrain Tri-38

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium zundukense strain Tri-38 NODE_11, whole genome

Gene Summary

Adenine Count

1275259 bp

Thymine Count

1270926 bp

Guanine Count

1703476 bp

Cytosine Count

1704399 bp

Genome Length

5954060 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglycosylaseB5P45_14835Not AvailableNegative2992517 - 299361740413.7
calcium-binding proteinB5P45_14840Not AvailableNegative2993638 - 299433325585.3
membrane protein fxsaB5P45_14845Not AvailablePositive2994511 - 299499617633.1
protein-export chaperone secbB5P45_14850Not AvailablePositive2995118 - 299562418296.0
dna polymerase iii subunit epsilonB5P45_14855Not AvailableNegative2995675 - 299639126279.4
dephospho-coa kinaseB5P45_14860Not AvailableNegative2996462 - 299704320759.1
shikimate dehydrogenaseB5P45_14865Not AvailableNegative2997040 - 299788830477.4
septum formation inhibitor mafB5P45_14870Not AvailableNegative2997881 - 299847421206.4
phosphoenolpyruvate synthase regulatory proteinB5P45_14875Not AvailableNegative2998518 - 299933929982.3
uroporphyrinogen decarboxylaseB5P45_14880Not AvailablePositive2999753 - 300078437531.4

Displaying genes 2871 – 2880 of 5666 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.