Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium oryzae |
| Strain | strain DSM 28571 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1719144 bp
Thymine Count
1676017 bp
Guanine Count
864313 bp
Cytosine Count
815328 bp
Genome Length
5074802 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylthioribose-1-phosphate isomerase | CLORY_05420 | Not Available | Positive | 611215 - 612297 | 40258.5 |
| transketolase | CLORY_05430 | Not Available | Positive | 612316 - 613230 | 33671.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CLORY_05440 | Not Available | Positive | 613243 - 614250 | 37018.2 |
| 2,3-diketo-5-methylthiopentyl-1-phosphate enolase | CLORY_05450 | Not Available | Positive | 614269 - 615411 | 41548.2 |
| hypothetical protein | CLORY_05460 | Not Available | Positive | 615680 - 615970 | 10969.7 |
| arabinose metabolism transcriptional repressor | CLORY_05470 | Not Available | Positive | 616081 - 617178 | 41671.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | CLORY_05480 | Not Available | Positive | 617542 - 618234 | 25760.8 |
| transaldolase | CLORY_05490 | Not Available | Positive | 618253 - 618900 | 23425.7 |
| hypothetical protein | CLORY_05500 | Not Available | Positive | 619587 - 619991 | 14730.4 |
| transposase is66 family protein | CLORY_05510 | Not Available | Negative | 621080 - 622522 | 56022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


