Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium oryzae |
| Strain | strain DSM 28571 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1719144 bp
Thymine Count
1676017 bp
Guanine Count
864313 bp
Cytosine Count
815328 bp
Genome Length
5074802 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/carnitine/choline transport atp-binding protein opuca | CLORY_05120 | Not Available | Positive | 582326 - 583450 | 41741.0 |
| choline transport system permease protein opubb | CLORY_05130 | Not Available | Positive | 583447 - 584097 | 22901.3 |
| carnitine transport permease protein opucd | CLORY_05140 | Not Available | Positive | 584109 - 584702 | 21054.8 |
| glycine betaine/carnitine/choline-binding protein opucc precursor | CLORY_05150 | Not Available | Positive | 584695 - 585582 | 33470.9 |
| macrophage migration inhibitory factor | CLORY_05160 | Not Available | Positive | 585721 - 586065 | 13020.5 |
| hypothetical protein | CLORY_05170 | Not Available | Positive | 586125 - 586448 | 11602.8 |
| lineage-specific thermal regulator protein | CLORY_05180 | Not Available | Positive | 586658 - 586996 | 13038.6 |
| hypothetical protein | CLORY_05190 | Not Available | Positive | 586998 - 587678 | 26285.3 |
| hypothetical protein | CLORY_05200 | Not Available | Positive | 587695 - 588231 | 20942.5 |
| non-reducing end alpha-l-arabinofuranosidase bogh43a precursor | CLORY_05210 | Not Available | Positive | 588269 - 589780 | 57660.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


