Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium oryzae |
| Strain | strain DSM 28571 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1719144 bp
Thymine Count
1676017 bp
Guanine Count
864313 bp
Cytosine Count
815328 bp
Genome Length
5074802 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | CLORY_41320 | Not Available | Negative | 4579204 - 4579638 | 16283.6 |
| shikimate kinase 1 | CLORY_41330 | Not Available | Negative | 4579638 - 4580153 | 19253.5 |
| shikimate dehydrogenase | CLORY_41340 | Not Available | Negative | 4580154 - 4580972 | 30374.7 |
| intracellular chorismate mutase | CLORY_41350 | Not Available | Negative | 4580991 - 4581254 | 10391.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CLORY_41360 | Not Available | Negative | 4581251 - 4582516 | 46007.2 |
| 3-dehydroquinate synthase | CLORY_41370 | Not Available | Negative | 4582519 - 4583592 | 39825.6 |
| prephenate dehydrogenase | CLORY_41380 | Not Available | Negative | 4583594 - 4584445 | 31425.8 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | CLORY_41390 | Not Available | Negative | 4584447 - 4585469 | 36857.9 |
| guanine/hypoxanthine permease pbug | CLORY_41400 | Not Available | Negative | 4585917 - 4587269 | 47644.0 |
| cytochrome b6-f complex iron-sulfur subunit | CLORY_41410 | Not Available | Positive | 4587598 - 4589139 | 57695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


