Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium oryzae |
| Strain | strain DSM 28571 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1719144 bp
Thymine Count
1676017 bp
Guanine Count
864313 bp
Cytosine Count
815328 bp
Genome Length
5074802 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | CLORY_39420 | Not Available | Negative | 4344165 - 4344863 | 26529.6 |
| xylose isomerase | CLORY_39430 | Not Available | Positive | 4345143 - 4346462 | 49650.8 |
| n-acetylglucosamine repressor | CLORY_39440 | Not Available | Positive | 4346666 - 4347823 | 42796.9 |
| xylulose kinase | CLORY_39450 | Not Available | Positive | 4347873 - 4349375 | 54822.8 |
| khg/kdpg aldolase | CLORY_39460 | Not Available | Positive | 4349404 - 4350042 | 22430.6 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CLORY_39470 | Not Available | Negative | 4350144 - 4350833 | 24732.2 |
| trna threonylcarbamoyladenosine dehydratase | CLORY_39480 | Not Available | Positive | 4350995 - 4351762 | 28040.7 |
| putative ribosomal n-acetyltransferase ydaf | CLORY_39490 | Not Available | Positive | 4351966 - 4352904 | 36618.3 |
| hth-type transcriptional repressor ytra | CLORY_39500 | Not Available | Positive | 4353675 - 4354055 | 14052.2 |
| abc transporter atp-binding protein ytrb | CLORY_39510 | Not Available | Positive | 4354059 - 4354904 | 31897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


