Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium oryzae |
| Strain | strain DSM 28571 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1719144 bp
Thymine Count
1676017 bp
Guanine Count
864313 bp
Cytosine Count
815328 bp
Genome Length
5074802 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system permease protein oppc | CLORY_26540 | Not Available | Negative | 2947152 - 2948072 | 33577.1 |
| dipeptide transport system permease protein dppb | CLORY_26550 | Not Available | Negative | 2948084 - 2949052 | 36051.0 |
| oligopeptide-binding protein appa precursor | CLORY_26560 | Not Available | Negative | 2949170 - 2950879 | 63931.3 |
| putative pin and tram-domain containing protein precursor | CLORY_26570 | Not Available | Positive | 2951288 - 2952397 | 40529.9 |
| proline--trna ligase | CLORY_26580 | Not Available | Positive | 2952635 - 2954074 | 55278.7 |
| mini-ribonuclease 3 | CLORY_26590 | Not Available | Positive | 2954337 - 2954786 | 17184.8 |
| putative trmh family trna/rrna methyltransferase | CLORY_26600 | Not Available | Positive | 2954770 - 2955582 | 29635.9 |
| yacp-like nyn domain protein | CLORY_26610 | Not Available | Positive | 2955605 - 2956114 | 19633.7 |
| rna polymerase sigma-h factor | CLORY_26620 | Not Available | Positive | 2956203 - 2956826 | 23751.7 |
| Trna-gly | Not Available | Not Available | Positive | 2956892 - 2956962 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


