Nitrobacter vulgaris strain Ab1 NvAb1_97

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter vulgaris strain Ab1 (NvAb1_97) is a Gram-negative bacterium characterized by the presence of flagella, which suggests its motility capabilities. This strain possesses a single replicon, indicating a streamlined genomic organization. The genomic data for Nitrobacter vulgaris strain Ab1 can be accessed under the accession number MWPQ00000000.1. As a member of the Nitrobacter genus, Nitrobacter vulgaris plays a critical role in the nitrogen cycle, particularly in the process of nitrification. This process involves the oxidation of nitrite to nitrate, contributing to soil fertility and influencing the availability of nitrogen for plant uptake. The motility provided by its flagella may enhance its ability to colonize and thrive in various environments, where it can effectively participate in these essential biochemical processes. Understanding the traits of Nitrobacter vulgaris strain Ab1 can offer insights into its ecological significance, particularly in agricultural contexts where nitrogen management is crucial for sustainable crop production. Its ability to effectively engage in nitrification processes underscores its potential importance in maintaining soil health and fertility in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter vulgaris
Strainstrain Ab1 NvAb1_97

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrobacter vulgaris strain Ab1 NvAb1_97, whole genome shotgun

Gene Summary

Adenine Count

785055 bp

Thymine Count

781644 bp

Guanine Count

1163358 bp

Cytosine Count

1170419 bp

Genome Length

3900573 bp

Protein-coding Genes

3492 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseB2M20_08600Not AvailableNegative1774352 - 177558746204.0
competence protein comecB2M20_08605Not AvailableNegative1775760 - 177667132637.0
glutamine--trna ligaseB2M20_08610Not AvailableNegative1776758 - 177843763522.7
glutamate--trna ligaseB2M20_08615Not AvailablePositive1778652 - 178007652802.5
citrate (si)-synthaseB2M20_08620Not AvailablePositive1780217 - 178151848423.1
lipid-a-disaccharide synthaseB2M20_08625Not AvailableNegative1781584 - 178277744087.9
hypothetical proteinB2M20_08630Not AvailableNegative1782777 - 178363429859.6
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseB2M20_08635Not AvailableNegative1783654 - 178446028653.4
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzB2M20_08640Not AvailableNegative1784460 - 178491516933.8
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseB2M20_08645Not AvailableNegative1784947 - 178602337504.8

Displaying genes 1651 – 1660 of 3558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.