Nitrobacter vulgaris strain Ab1 NvAb1_97

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Nitrobacter

Description

Nitrobacter vulgaris strain Ab1 (NvAb1_97) is a Gram-negative bacterium characterized by the presence of flagella, which suggests its motility capabilities. This strain possesses a single replicon, indicating a streamlined genomic organization. The genomic data for Nitrobacter vulgaris strain Ab1 can be accessed under the accession number MWPQ00000000.1. As a member of the Nitrobacter genus, Nitrobacter vulgaris plays a critical role in the nitrogen cycle, particularly in the process of nitrification. This process involves the oxidation of nitrite to nitrate, contributing to soil fertility and influencing the availability of nitrogen for plant uptake. The motility provided by its flagella may enhance its ability to colonize and thrive in various environments, where it can effectively participate in these essential biochemical processes. Understanding the traits of Nitrobacter vulgaris strain Ab1 can offer insights into its ecological significance, particularly in agricultural contexts where nitrogen management is crucial for sustainable crop production. Its ability to effectively engage in nitrification processes underscores its potential importance in maintaining soil health and fertility in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusNitrobacter
SpeciesNitrobacter vulgaris
Strainstrain Ab1 NvAb1_97

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrobacter vulgaris strain Ab1 NvAb1_97, whole genome shotgun

Gene Summary

Adenine Count

785055 bp

Thymine Count

781644 bp

Guanine Count

1163358 bp

Cytosine Count

1170419 bp

Genome Length

3900573 bp

Protein-coding Genes

3492 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinaseB2M20_06440Not AvailablePositive1326287 - 132774752537.1
bifunctional glutamine synthetase adenylyltransferase/deadenyltransferaseB2M20_06445Not AvailablePositive1327744 - 1330707109192.0
pas domain-containing sensor histidine kinaseB2M20_06450Not AvailableNegative1330715 - 133302184310.5
cation diffusion facilitator family transporterB2M20_06455Not AvailableNegative1333225 - 133460749157.6
vanz family proteinB2M20_06460Not AvailableNegative1334743 - 133509912612.9
dna-binding proteinB2M20_06465Not AvailablePositive1335380 - 133567910605.3
glycogen phosphorylaseB2M20_06470Not AvailableNegative1335800 - 133828393560.7
malto-oligosyltrehalose trehalohydrolaseB2M20_06475Not AvailableNegative1338486 - 134024965623.4
glycogen debranching enzyme glgxB2M20_06480Not AvailableNegative1340246 - 134232478512.8
1,4-alpha-glucan branching enzymeB2M20_06485Not AvailableNegative1342321 - 134447181216.8

Displaying genes 1241 – 1250 of 3558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.