Clostridium beijerinckii strain Br21 CBEIBR21_SCAFF28

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii strain Br21, designated as CBEIBR21_SCAFF28, is a Gram-positive, rod-shaped bacterium that thrives in freshwater and soil habitats. This strain is characterized as a chemoorganotroph, utilizing organic compounds as its energy source. It is an anaerobic organism, meaning it requires an oxygen-free environment for growth. C. beijerinckii strain Br21 exhibits a mesophilic temperature range, which typically supports growth at moderate temperatures. The cells can be found in pairs or singles and possess flagella, indicating motility. This motility may play a significant role in navigating its environment, particularly in soil and freshwater ecosystems. The strain has a single replicon and a single membrane, aligning with typical characteristics of bacteria within its genus. Its free-living biotic relationship suggests that it plays an independent role in its ecological niche, potentially contributing to nutrient cycling in its habitats. The ecological insights provided by this strain highlight its role in anaerobic environments, where it may be involved in processes such as organic matter degradation or the cycling of nutrients in freshwater and soil ecosystems. Understanding the traits of C. beijerinckii strain Br21 may contribute to insights into microbial diversity and function in anaerobic conditions. The accession number for this strain is MWMH00000000.1, which can be referenced for further genomic and taxonomic studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
Strainstrain Br21 CBEIBR21_SCAFF28

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii strain Br21 CBEIBR21_SCAFF28
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Clostridium beijerinckii strain Br21 CBEIBR21_SCAFF28, whole

Gene Summary

Adenine Count

2175213 bp

Thymine Count

2030840 bp

Guanine Count

957403 bp

Cytosine Count

809468 bp

Genome Length

5992945 bp

Protein-coding Genes

5090 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCBEIBR21_08105Not AvailablePositive1894938 - 189628450456.7
hybrid sensor histidine kinase/response regulatorCBEIBR21_08110Not AvailablePositive1896373 - 189821171391.8
cell shape-determining proteinCBEIBR21_08115Not AvailablePositive1898808 - 190042460424.4
cytochrome c551CBEIBR21_08120Not AvailablePositive1900589 - 19007446118.23
transcription factor ydebCBEIBR21_08125Not AvailableNegative1901247 - 190172617988.8
hypothetical proteinCBEIBR21_08130Not AvailablePositive1902081 - 190289331757.4
uridine kinaseCBEIBR21_08135Not AvailablePositive1903082 - 190370223519.3
haloacid dehalogenaseCBEIBR21_08140Not AvailablePositive1903829 - 190449425193.4
alpha/beta hydrolaseCBEIBR21_08145Not AvailablePositive1904529 - 190514322800.9
threonine ammonia-lyaseCBEIBR21_08150Not AvailableNegative1905271 - 190649144401.7

Displaying genes 1591 – 1600 of 5169 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.