Smithella sp. PtaU1.Bin162

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophia

Order

Syntrophales

Family

Smithellaceae

Genus

Smithella

Description

Smithella sp. PtaU1.Bin162 is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this organism is represented by the accession number MVRV00000000.1, which serves as a reference for further genomic studies and annotations. While specific metabolic pathways and ecological roles of Smithella sp. PtaU1.Bin162 are not provided, the genus Smithella is generally known for its association with anaerobic environments and its ability to degrade complex organic matter. This suggests that Smithella sp. PtaU1.Bin162 may play a role in the biogeochemical cycling of nutrients, particularly in environments such as sediments or anaerobic digesters, where organic matter decomposition is crucial. The presence of a single replicon can imply efficient replication and possibly a well-adapted lifestyle within its ecological niche. Such traits highlight the potential importance of Smithella sp. PtaU1.Bin162 in microbial communities, particularly in processes related to organic matter turnover and energy flow within anaerobic ecosystems. Understanding this organism's specific contributions could provide insights into the dynamics of microbial communities and their roles in environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophia
OrderSyntrophales
FamilySmithellaceae
GenusSmithella
SpeciesSmithella sp. PtaU1.Bin162
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Smithella sp. PtaU1.Bin162 A4E71_contig000191, whole genome

Gene Summary

Adenine Count

983730 bp

Thymine Count

982614 bp

Guanine Count

818382 bp

Cytosine Count

811809 bp

Genome Length

3596535 bp

Protein-coding Genes

3311 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine--trna ligaseA4E71_03230Not AvailablePositive3437311 - 343858248046.2
aspartate--trna ligaseA4E71_03231Not AvailablePositive3438585 - 344035766642.4
2-isopropylmalate synthaseA4E71_03232Not AvailablePositive3440380 - 344228172083.6
atp-dependent dna helicase pcraA4E71_03233Not AvailableNegative3442305 - 344427575891.5
adenylate kinaseA4E71_03234Not AvailableNegative3444321 - 344496223392.6
2,3-diketo-l-gulonate-binding periplasmic protein yiao precursorA4E71_03235Not AvailablePositive3445266 - 344626136907.1
tripartite atp-independent periplasmic transporterA4E71_03236Not AvailablePositive3446421 - 344695719873.7
sialic acid trap transporter permease protein siatA4E71_03237Not AvailablePositive3446976 - 344828047056.5
kipi antagonistA4E71_03238Not AvailableNegative3448334 - 344926934428.3
kinase a inhibitorA4E71_03239Not AvailableNegative3449266 - 344993725267.1

Displaying genes 3231 – 3240 of 3370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.