Smithella sp. PtaU1.Bin162

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophia

Order

Syntrophales

Family

Smithellaceae

Genus

Smithella

Description

Smithella sp. PtaU1.Bin162 is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this organism is represented by the accession number MVRV00000000.1, which serves as a reference for further genomic studies and annotations. While specific metabolic pathways and ecological roles of Smithella sp. PtaU1.Bin162 are not provided, the genus Smithella is generally known for its association with anaerobic environments and its ability to degrade complex organic matter. This suggests that Smithella sp. PtaU1.Bin162 may play a role in the biogeochemical cycling of nutrients, particularly in environments such as sediments or anaerobic digesters, where organic matter decomposition is crucial. The presence of a single replicon can imply efficient replication and possibly a well-adapted lifestyle within its ecological niche. Such traits highlight the potential importance of Smithella sp. PtaU1.Bin162 in microbial communities, particularly in processes related to organic matter turnover and energy flow within anaerobic ecosystems. Understanding this organism's specific contributions could provide insights into the dynamics of microbial communities and their roles in environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophia
OrderSyntrophales
FamilySmithellaceae
GenusSmithella
SpeciesSmithella sp. PtaU1.Bin162
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Smithella sp. PtaU1.Bin162 A4E71_contig000191, whole genome

Gene Summary

Adenine Count

983730 bp

Thymine Count

982614 bp

Guanine Count

818382 bp

Cytosine Count

811809 bp

Genome Length

3596535 bp

Protein-coding Genes

3311 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recgA4E71_03210Not AvailableNegative3413153 - 341561293237.6
phosphoribosylformylglycinamidine cyclo-ligaseA4E71_03211Not AvailablePositive3415781 - 341683038150.9
phosphoribosylglycinamide formyltransferaseA4E71_03212Not AvailablePositive3416830 - 341750725183.8
hypothetical proteinA4E71_03213Not AvailablePositive3417467 - 341795517604.7
hypothetical proteinA4E71_03214Not AvailablePositive3417948 - 341939054013.2
pyrophosphate--fructose 6-phosphate 1-phosphotransferaseA4E71_03215Not AvailablePositive3419396 - 342070347689.0
50s ribosomal protein l28A4E71_03216Not AvailablePositive3420777 - 34209747218.96
hypothetical proteinA4E71_03217Not AvailableNegative3420967 - 342176130542.3
hypothetical proteinA4E71_03218Not AvailableNegative3421838 - 34220508260.27
single-stranded-dna-specific exonuclease recjA4E71_03219Not AvailablePositive3422280 - 342401964116.6

Displaying genes 3211 – 3220 of 3370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.