Smithella sp. PtaU1.Bin162

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophia

Order

Syntrophales

Family

Smithellaceae

Genus

Smithella

Description

Smithella sp. PtaU1.Bin162 is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this organism is represented by the accession number MVRV00000000.1, which serves as a reference for further genomic studies and annotations. While specific metabolic pathways and ecological roles of Smithella sp. PtaU1.Bin162 are not provided, the genus Smithella is generally known for its association with anaerobic environments and its ability to degrade complex organic matter. This suggests that Smithella sp. PtaU1.Bin162 may play a role in the biogeochemical cycling of nutrients, particularly in environments such as sediments or anaerobic digesters, where organic matter decomposition is crucial. The presence of a single replicon can imply efficient replication and possibly a well-adapted lifestyle within its ecological niche. Such traits highlight the potential importance of Smithella sp. PtaU1.Bin162 in microbial communities, particularly in processes related to organic matter turnover and energy flow within anaerobic ecosystems. Understanding this organism's specific contributions could provide insights into the dynamics of microbial communities and their roles in environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophia
OrderSyntrophales
FamilySmithellaceae
GenusSmithella
SpeciesSmithella sp. PtaU1.Bin162
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Smithella sp. PtaU1.Bin162 A4E71_contig000191, whole genome

Gene Summary

Adenine Count

983730 bp

Thymine Count

982614 bp

Guanine Count

818382 bp

Cytosine Count

811809 bp

Genome Length

3596535 bp

Protein-coding Genes

3311 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA4E71_01700Not AvailablePositive1794858 - 179581434156.4
3-oxoacyl-(acyl-carrier-protein) reductase fabgA4E71_01701Not AvailableNegative1795829 - 179657826372.3
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenaseA4E71_01702Not AvailableNegative1796614 - 179742628912.0
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursorA4E71_01703Not AvailableNegative1797608 - 179907154912.0
hypothetical proteinA4E71_01704Not AvailableNegative1799105 - 17992153939.94
glutaconate coa-transferase subunit bA4E71_01705Not AvailableNegative1799212 - 180002429686.9
3-oxoadipate coa-transferase subunit aA4E71_01706Not AvailableNegative1800017 - 180106338712.4
high-affinity branched-chain amino acid transport atp-binding protein livfA4E71_01707Not AvailableNegative1801259 - 180197526236.1
lipopolysaccharide export system atp-binding protein lptbA4E71_01708Not AvailableNegative1802061 - 180280727733.6
leucine/isoleucine/valine transporter permease subunitA4E71_01709Not AvailableNegative1802804 - 180380536416.2

Displaying genes 1721 – 1730 of 3370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.