Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide pyruvyl transferaseA4E57_04172Not AvailableNegative4269266 - 427020435891.1
lipopolysaccharide biosynthesis protein wzxcA4E57_04173Not AvailableNegative4270198 - 427161052584.7
galactoside o-acetyltransferaseA4E57_04174Not AvailableNegative4271723 - 427232521828.6
udp-n-acetylglucosamine 2-epimeraseA4E57_04175Not AvailableNegative4272318 - 427335838910.9
tpr repeat-containing protein yfgc precursorA4E57_04176Not AvailableNegative4273748 - 427522954928.9
hypothetical proteinA4E57_04177Not AvailableNegative4275240 - 427596226525.0
hypothetical proteinA4E57_04178Not AvailableNegative4276077 - 4279718132766.0
hypothetical proteinA4E57_04179Not AvailablePositive4279812 - 428013812290.5
anaerobic glycerol-3-phosphate dehydrogenase subunit cA4E57_04180Not AvailablePositive4280170 - 428132143776.5
formate dehydrogenase accessory proteinA4E57_04181Not AvailablePositive4281338 - 428212928788.3

Displaying genes 4171 – 4180 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.