Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative polyketide biosynthesis zinc-dependent hydrolase baebA4E57_03740Not AvailableNegative3850816 - 385217750210.1
putative periplasmic serine endoprotease degp-like precursorA4E57_03741Not AvailableNegative3852189 - 385256012545.2
succinyl-coa ligase (adp-forming) subunit alphaA4E57_03742Not AvailableNegative3853217 - 385588397258.5
ribosomal protein s12 methylthiotransferase rimoA4E57_03743Not AvailableNegative3855938 - 385744657653.7
ribosomal protein l11 methyltransferaseA4E57_03744Not AvailableNegative3857549 - 385847534160.2
hypothetical proteinA4E57_03745Not AvailableNegative3858604 - 38588258312.97
glutathione-independent formaldehyde dehydrogenaseA4E57_03746Not AvailableNegative3859122 - 386033643448.9
protoporphyrinogen oxidaseA4E57_03747Not AvailableNegative3860573 - 386188348203.8
hypothetical proteinA4E57_03748Not AvailablePositive3862170 - 386299430295.8
type iv secretion system protein virb1A4E57_03749Not AvailablePositive3863314 - 386396423615.3

Displaying genes 3741 – 3750 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.