Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent protein deacetylaseA4E57_03400Not AvailablePositive3520432 - 352118127112.6
alginate biosynthesis protein algaA4E57_03401Not AvailablePositive3521436 - 352250339943.1
competence protein commA4E57_03402Not AvailablePositive3522565 - 352409755776.6
cupin domain proteinA4E57_03403Not AvailablePositive3524250 - 352464515658.5
hypothetical proteinA4E57_03404Not AvailablePositive3524648 - 352519320782.9
hypothetical proteinA4E57_03405Not AvailablePositive3525296 - 352600927440.9
ribosomal protein s12 methylthiotransferase rimoA4E57_03406Not AvailablePositive3525999 - 352730648300.4
lysine--trna ligaseA4E57_03407Not AvailablePositive3527290 - 352875356479.1
hypothetical proteinA4E57_03408Not AvailablePositive3529112 - 352942911690.0
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenaseA4E57_03409Not AvailablePositive3529478 - 353025427401.3

Displaying genes 3401 – 3410 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.