Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucine/isoleucine/valine transporter permease subunitA4E57_03390Not AvailablePositive3512617 - 351362737289.2
lipopolysaccharide export system atp-binding protein lptbA4E57_03391Not AvailablePositive3513734 - 351450128698.0
high-affinity branched-chain amino acid transport atp-binding protein livfA4E57_03392Not AvailablePositive3514504 - 351525027303.7
long-chain-fatty-acid--coa ligaseA4E57_03393Not AvailablePositive3515263 - 351692163379.2
Trna-thrNot AvailableNot AvailablePositive3516967 - 3517041Not Available
hypothetical proteinA4E57_03395Not AvailableNegative3517244 - 351754011157.9
hypothetical proteinA4E57_03396Not AvailableNegative3518050 - 35182055995.64
zinc ribbon domain proteinA4E57_03397Not AvailableNegative3518202 - 351850110985.9
n5-carboxyaminoimidazole ribonucleotide mutaseA4E57_03398Not AvailablePositive3518710 - 351920717858.1
peptidase family s58A4E57_03399Not AvailablePositive3519319 - 352031433953.2

Displaying genes 3391 – 3400 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.