Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative sugar phosphate isomerase ywlfA4E57_01350Not AvailablePositive1400623 - 140108116814.1
serine hydroxymethyltransferaseA4E57_01351Not AvailablePositive1401053 - 140231246656.2
pp_01338A4E57_01352Not AvailablePositive1402309 - 1402782Not Available
transcriptional repressor nrdrA4E57_01353Not AvailablePositive1402961 - 140336215524.0
riboflavin biosynthesis protein ribdA4E57_01354Not AvailablePositive1403359 - 140446540219.5
riboflavin synthaseA4E57_01355Not AvailablePositive1404446 - 140509623939.7
riboflavin biosynthesis protein ribbaA4E57_01356Not AvailablePositive1405096 - 140630144504.9
6,7-dimethyl-8-ribityllumazine synthaseA4E57_01357Not AvailablePositive1406312 - 140680017157.6
hypothetical proteinA4E57_01358Not AvailablePositive1406809 - 140719214802.8
yacp-like nyn domain proteinA4E57_01359Not AvailablePositive1407214 - 140769918170.8

Displaying genes 1351 – 1360 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.