Syntrophorhabdaceae bacterium PtaU1.Bin034

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophorhabdia

Order

Syntrophorhabdales

Family

Syntrophorhabdaceae

Genus

Description

Syntrophorhabdaceae bacterium PtaU1.Bin034 is characterized by having a single replicon, which is significant for its genomic structure and function. The genome of this bacterium is cataloged under the accession number MVRP00000000.1, providing a reference point for researchers interested in its genetic composition and potential applications in microbiology. The classification within the Syntrophorhabdaceae family suggests that this bacterium may play a role in syntrophic relationships, often involving the interspecies transfer of electrons or metabolites in various environments, particularly in anaerobic conditions. The ability to form such interactions can be crucial for nutrient cycling and energy flow in ecosystems where these bacteria thrive. Understanding the traits of Syntrophorhabdaceae bacterium PtaU1.Bin034 contributes to the broader knowledge of microbial communities and their functions. Its single replicon may indicate a streamlined genomic organization, which can affect its metabolic capabilities and interactions with other microorganisms. Insights into such traits can enhance our understanding of microbial ecology, especially in environments where syntrophic relationships are pivotal for the degradation of organic materials and the maintenance of ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophorhabdaceae bacterium PtaU1.Bin034

Gene Summary

Adenine Count

1162311 bp

Thymine Count

1155423 bp

Guanine Count

1349860 bp

Cytosine Count

1350823 bp

Genome Length

5018417 bp

Protein-coding Genes

4885 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inositol-3-phosphate synthaseA4E57_01300Not AvailableNegative1353681 - 135477840243.4
fumarate hydratase class i, aerobicA4E57_01301Not AvailableNegative1354850 - 135540419978.3
l(+)-tartrate dehydratase subunit alphaA4E57_01302Not AvailableNegative1355413 - 135625230042.3
nad-dependent malic enzymeA4E57_01303Not AvailableNegative1356255 - 135760149200.1
dna ligaseA4E57_01304Not AvailablePositive1357848 - 135989077102.0
s-methyl-5'-thioinosine phosphorylaseA4E57_01305Not AvailablePositive1359887 - 136057925401.6
5-methylthioadenosine/s-adenosylhomocysteine deaminaseA4E57_01306Not AvailablePositive1360579 - 136183847552.9
hypothetical proteinA4E57_01307Not AvailablePositive1361835 - 136227817345.1
ultraviolet n-glycosylase/ap lyaseA4E57_01308Not AvailablePositive1362278 - 136292824358.0
outer membrane protein assembly factor bama precursorA4E57_01309Not AvailablePositive1363056 - 136530583622.8

Displaying genes 1301 – 1310 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.