Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_05015 | Not Available | Positive | 1094881 - 1095174 | 10331.1 |
| 4-carboxymuconolactone decarboxylase | BST45_05020 | Not Available | Negative | 1095165 - 1095752 | 21931.5 |
| cro/cl family transcriptional regulator | BST45_05025 | Not Available | Negative | 1095749 - 1097164 | 52955.9 |
| acyl-[acyl-carrier-protein] thioesterase | BST45_05030 | Not Available | Positive | 1097313 - 1098107 | 30138.9 |
| isocitrate lyase | BST45_05035 | Not Available | Positive | 1098361 - 1099647 | 47205.4 |
| 3-hydroxybutyryl-coa dehydrogenase | BST45_05040 | Not Available | Positive | 1099729 - 1100592 | 30743.3 |
| sam-dependent methyltransferase | BST45_05045 | Not Available | Negative | 1100626 - 1101489 | 32848.4 |
| prenyltransferase | BST45_05050 | Not Available | Negative | 1101645 - 1102649 | 36091.4 |
| tetr family transcriptional regulator | BST45_05055 | Not Available | Negative | 1102659 - 1103363 | 26280.0 |
| hypothetical protein | BST45_05060 | Not Available | Positive | 1103546 - 1104868 | 48956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


