Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_04915 | Not Available | Positive | 1074716 - 1075591 | 30074.5 |
| anti-sigma factor | BST45_04920 | Not Available | Negative | 1075676 - 1076371 | 23648.4 |
| rna polymerase subunit sigma | BST45_04925 | Not Available | Negative | 1076399 - 1076962 | 20865.5 |
| hypothetical protein | BST45_04930 | Not Available | Negative | 1077011 - 1077793 | 28707.3 |
| sam-dependent methyltransferase | BST45_04935 | Not Available | Negative | 1077790 - 1079052 | 47644.2 |
| hypothetical protein | BST45_04940 | Not Available | Negative | 1079049 - 1079753 | 26855.4 |
| amine oxidase | BST45_04945 | Not Available | Negative | 1079747 - 1081054 | 47402.5 |
| hypothetical protein | BST45_04950 | Not Available | Negative | 1081101 - 1083932 | 102844.0 |
| hypothetical protein | BST45_04955 | Not Available | Negative | 1083989 - 1084411 | 15404.5 |
| tetr family transcriptional regulator | BST45_04960 | Not Available | Positive | 1084647 - 1085336 | 24887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


