Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BST45_04180 | Not Available | Positive | 916075 - 917652 | 55073.7 |
| riboflavin biosynthesis protein ribd | BST45_04185 | Not Available | Negative | 917633 - 918679 | 36144.4 |
| ribulose-phosphate 3-epimerase | BST45_04190 | Not Available | Negative | 918687 - 919376 | 23839.5 |
| rrna cytosine-c5-methyltransferase | BST45_04195 | Not Available | Negative | 919387 - 920772 | 48495.0 |
| methionyl-trna formyltransferase | BST45_04200 | Not Available | Negative | 920769 - 921698 | 32345.2 |
| sam-dependent methyltransferase | BST45_04205 | Not Available | Positive | 921890 - 922714 | 29327.0 |
| marr family transcriptional regulator | BST45_04210 | Not Available | Negative | 922733 - 923215 | 17317.0 |
| sam-dependent methyltransferase | BST45_04215 | Not Available | Positive | 923353 - 924177 | 29835.5 |
| primosome assembly protein pria | BST45_04220 | Not Available | Negative | 924186 - 926126 | 68893.7 |
| hypothetical protein | BST45_04225 | Not Available | Negative | 926173 - 926919 | 26755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


