Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphokinase | BST45_03955 | Not Available | Negative | 871979 - 873160 | 42228.1 |
| dna repair protein recn | BST45_03960 | Not Available | Negative | 873333 - 875084 | 62033.2 |
| nad kinase | BST45_03965 | Not Available | Negative | 875096 - 876019 | 32993.8 |
| 16s/23s rrna (cytidine-2'-o)-methyltransferase | BST45_03970 | Not Available | Negative | 876016 - 876825 | 27998.9 |
| hypothetical protein | BST45_03975 | Not Available | Negative | 876833 - 877021 | 6636.76 |
| had family hydrolase | BST45_03980 | Not Available | Negative | 877046 - 878047 | 35085.9 |
| hypothetical protein | BST45_03985 | Not Available | Negative | 878049 - 878696 | 22768.8 |
| hypothetical protein | BST45_03990 | Not Available | Negative | 878938 - 879321 | 12793.5 |
| hypothetical protein | BST45_03995 | Not Available | Positive | 879826 - 881088 | 44874.4 |
| tyrosine--trna ligase | BST45_04005 | Not Available | Negative | 882531 - 883796 | 45942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


