Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BST45_03550 | Not Available | Positive | 784452 - 785213 | 25893.2 |
| phosphate starvation-inducible protein phoh | BST45_03555 | Not Available | Positive | 785328 - 786374 | 37330.0 |
| rrna maturation rnase ybey | BST45_03560 | Not Available | Positive | 786393 - 786926 | 19727.4 |
| hypothetical protein | BST45_03565 | Not Available | Positive | 786923 - 788230 | 46949.8 |
| cytidine deaminase | BST45_03570 | Not Available | Positive | 788193 - 788543 | 11282.5 |
| gtpase era | BST45_03575 | Not Available | Positive | 788608 - 789507 | 32500.4 |
| amidase | BST45_03580 | Not Available | Negative | 789504 - 790958 | 50903.5 |
| dna repair protein reco | BST45_03585 | Not Available | Positive | 791020 - 791808 | 28715.7 |
| isoprenyl transferase | BST45_03590 | Not Available | Positive | 791811 - 792704 | 33980.4 |
| hypothetical protein | BST45_03595 | Not Available | Positive | 792704 - 793150 | 16012.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


