Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | BST45_00245 | Not Available | Negative | 47675 - 48580 | 32947.5 |
| hypothetical protein | BST45_00250 | Not Available | Negative | 48604 - 50184 | 53689.1 |
| hypothetical protein | BST45_00255 | Not Available | Negative | 50199 - 50378 | 5919.26 |
| antitoxin | BST45_00260 | Not Available | Positive | 50542 - 50799 | 9117.86 |
| vapc toxin family pin domain ribonuclease | BST45_00265 | Not Available | Positive | 50824 - 51252 | 15786.9 |
| hypothetical protein | BST45_00270 | Not Available | Negative | 51265 - 52173 | 34211.5 |
| tetr family transcriptional regulator | BST45_00275 | Not Available | Positive | 52262 - 52975 | 24813.6 |
| glyoxalase | BST45_00280 | Not Available | Negative | 52967 - 53551 | 21384.3 |
| alpha/beta hydrolase | BST45_00290 | Not Available | Positive | 53892 - 55025 | 40888.5 |
| copy family transcriptional regulator | BST45_00295 | Not Available | Negative | 55314 - 55619 | 10898.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


