Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase assembly protein hupf | BST45_02975 | Not Available | Negative | 639310 - 640041 | 25487.4 |
| carbamoyltransferase hypf | BST45_02980 | Not Available | Negative | 640038 - 642410 | 83258.1 |
| hydrogenase accessory protein hypb | BST45_02985 | Not Available | Negative | 642447 - 643205 | 27194.1 |
| hydrogenase expression protein huph | BST45_02990 | Not Available | Negative | 643218 - 643553 | 12316.7 |
| hypothetical protein | BST45_02995 | Not Available | Negative | 643811 - 644071 | 9053.81 |
| mycothione reductase | BST45_03005 | Not Available | Negative | 644243 - 645622 | 50025.7 |
| alpha/beta hydrolase | BST45_03010 | Not Available | Negative | 645635 - 646645 | 37111.9 |
| malate dehydrogenase (quinone) | BST45_03015 | Not Available | Positive | 646901 - 648391 | 53907.5 |
| gnat family n-acetyltransferase | BST45_03020 | Not Available | Positive | 648388 - 648858 | 17642.2 |
| uroporphyrinogen-iii c-methyltransferase | BST45_03025 | Not Available | Positive | 649110 - 650336 | 42522.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


