Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein | BST45_02870 | Not Available | Negative | 618326 - 620086 | 62053.1 |
| fasciclin | BST45_02875 | Not Available | Negative | 620181 - 620846 | 21849.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BST45_02880 | Not Available | Positive | 620969 - 622201 | 43049.3 |
| zinc metalloprotease | BST45_02885 | Not Available | Positive | 622246 - 623457 | 42722.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BST45_02890 | Not Available | Positive | 623564 - 624736 | 40727.8 |
| gnat family n-acetyltransferase | BST45_02895 | Not Available | Positive | 624782 - 625636 | 30435.5 |
| penicillin-binding protein | BST45_02905 | Not Available | Positive | 626092 - 627909 | 63176.2 |
| vapc toxin family pin domain ribonuclease | BST45_02910 | Not Available | Negative | 628011 - 628391 | 14106.0 |
| hypothetical protein | BST45_02915 | Not Available | Negative | 628388 - 628567 | 6336.28 |
| hypothetical protein | BST45_02920 | Not Available | Positive | 628837 - 629424 | 21262.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


