Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | BST45_02820 | Not Available | Positive | 608674 - 609504 | 29478.1 |
| amidase | BST45_02825 | Not Available | Positive | 609547 - 610977 | 51682.6 |
| transcriptional regulator | BST45_02830 | Not Available | Negative | 611318 - 612052 | 26744.2 |
| ump kinase | BST45_02835 | Not Available | Positive | 612427 - 613194 | 27057.9 |
| ribosome recycling factor | BST45_02840 | Not Available | Positive | 613569 - 614126 | 20912.9 |
| phosphatidate cytidylyltransferase | BST45_02845 | Not Available | Positive | 614159 - 615085 | 32311.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | BST45_02850 | Not Available | Positive | 615108 - 616202 | 39408.6 |
| hypothetical protein | BST45_02855 | Not Available | Positive | 616352 - 616861 | 17811.2 |
| hypothetical protein | BST45_02860 | Not Available | Positive | 616861 - 617727 | 30017.5 |
| hypothetical protein | BST45_02865 | Not Available | Negative | 617732 - 617986 | 9624.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


