Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | BST45_02185 | Not Available | Positive | 474989 - 477910 | 106676.0 |
| hypothetical protein | BST45_02190 | Not Available | Negative | 477984 - 478229 | 9131.3 |
| lysine--trna ligase | BST45_02195 | Not Available | Negative | 478345 - 481662 | 121571.0 |
| translation initiation factor if-3 | BST45_02200 | Not Available | Positive | 482098 - 482706 | 22483.9 |
| 50s ribosomal protein l35 | BST45_02205 | Not Available | Positive | 482738 - 482932 | 7171.78 |
| 50s ribosomal protein l20 | BST45_02210 | Not Available | Positive | 482992 - 483381 | 14401.4 |
| rna methyltransferase | BST45_02215 | Not Available | Positive | 483397 - 484188 | 27361.1 |
| hypothetical protein | BST45_02220 | Not Available | Negative | 484191 - 485249 | 40286.0 |
| pe family protein | BST45_02225 | Not Available | Positive | 485545 - 486483 | 29871.9 |
| adenylate/guanylate cyclase domain-containing protein | BST45_02230 | Not Available | Positive | 486590 - 487537 | 33707.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


