Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | BST45_01985 | Not Available | Positive | 431719 - 432453 | 25608.5 |
| inositol monophosphatase | BST45_01990 | Not Available | Positive | 432460 - 433260 | 27348.3 |
| imidazole glycerol phosphate synthase subunit hisf | BST45_01995 | Not Available | Positive | 433262 - 434065 | 27285.6 |
| phosphoribosyl-amp cyclohydrolase | BST45_02000 | Not Available | Positive | 434062 - 434409 | 12502.7 |
| hypothetical protein | BST45_02005 | Not Available | Positive | 434524 - 434877 | 12229.6 |
| hypothetical protein | BST45_02010 | Not Available | Positive | 435087 - 436241 | 36813.7 |
| peroxiredoxin | BST45_02015 | Not Available | Negative | 436265 - 436729 | 16756.1 |
| anthranilate synthase component i | BST45_02020 | Not Available | Positive | 436986 - 438536 | 55498.8 |
| hypothetical protein | BST45_02025 | Not Available | Positive | 438562 - 439158 | 20499.2 |
| indole-3-glycerol phosphate synthase | BST45_02030 | Not Available | Positive | 439239 - 440057 | 28089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


