Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BST45_20530 | Not Available | Negative | 4403497 - 4403878 | 13055.7 |
| pe family protein | BST45_20535 | Not Available | Positive | 4404091 - 4404260 | 5262.18 |
| hypothetical protein | BST45_20540 | Not Available | Positive | 4404261 - 4404608 | 11920.3 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BST45_20545 | Not Available | Negative | 4405017 - 4405290 | 9394.03 |
| is3 family transposase | BST45_20550 | Not Available | Positive | 4405291 - 4405618 | 12289.7 |
| is3 family transposase | BST45_20555 | Not Available | Positive | 4405619 - 4405946 | 12393.8 |
| hypothetical protein | BST45_20560 | Not Available | Positive | 4405947 - 4406265 | 8308.2 |
| hypothetical protein | BST45_20565 | Not Available | Positive | 4406266 - 4406576 | 7867.49 |
| hypothetical protein | BST45_20575 | Not Available | Negative | 4407194 - 4407498 | 10752.9 |
| hypothetical protein | BST45_20580 | Not Available | Positive | 4407499 - 4407803 | 10050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


