Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_20370 | Not Available | Positive | 4386029 - 4386117 | 3068.74 |
| hypothetical protein | BST45_20375 | Not Available | Negative | 4386165 - 4387218 | 28365.3 |
| hypothetical protein | BST45_20380 | Not Available | Positive | 4387219 - 4388298 | 34929.5 |
| pe family protein | BST45_20385 | Not Available | Positive | 4389114 - 4389305 | 5951.04 |
| hypothetical protein | BST45_20390 | Not Available | Positive | 4389306 - 4390192 | 23099.3 |
| polyketide synthase | BST45_20395 | Not Available | Negative | 4390284 - 4391215 | 33253.5 |
| polyketide synthase | BST45_20400 | Not Available | Positive | 4391216 - 4392135 | 32610.4 |
| transposase | BST45_20405 | Not Available | Positive | 4392167 - 4392598 | 15996.1 |
| is3 family transposase | BST45_20410 | Not Available | Positive | 4392595 - 4392983 | 14673.8 |
| hypothetical protein | BST45_20425 | Not Available | Negative | 4393668 - 4394342 | 20863.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


