Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | BST45_20260 | Not Available | Negative | 4359399 - 4360772 | 51953.2 |
| polyketide synthase | BST45_20265 | Not Available | Positive | 4361280 - 4363225 | 67903.6 |
| hypothetical protein | BST45_20270 | Not Available | Positive | 4363226 - 4364725 | 47437.5 |
| hypothetical protein | BST45_20275 | Not Available | Positive | 4365014 - 4365102 | 3094.78 |
| hypothetical protein | BST45_20280 | Not Available | Positive | 4365103 - 4366569 | 48578.6 |
| hypothetical protein | BST45_20285 | Not Available | Positive | 4366710 - 4366869 | 5238.2 |
| group ii intron reverse transcriptase/maturase | BST45_20290 | Not Available | Positive | 4367250 - 4368512 | 48732.8 |
| pe family protein | BST45_20295 | Not Available | Negative | 4368600 - 4369822 | 35265.5 |
| pe-pgrs family protein | BST45_20300 | Not Available | Positive | 4370217 - 4371464 | 43817.3 |
| is30 family transposase | BST45_20310 | Not Available | Negative | 4373224 - 4374369 | 42011.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


