Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_19835 | Not Available | Positive | 4264997 - 4267749 | 89185.3 |
| hypothetical protein | BST45_19840 | Not Available | Positive | 4267985 - 4268194 | 7712.24 |
| vapc toxin family pin domain ribonuclease | BST45_19845 | Not Available | Positive | 4268182 - 4268613 | 15580.5 |
| isocitrate lyase | BST45_19850 | Not Available | Negative | 4268637 - 4270937 | 85397.5 |
| hypothetical protein | BST45_19855 | Not Available | Positive | 4271173 - 4271382 | 7333.06 |
| hypothetical protein | BST45_19860 | Not Available | Positive | 4272166 - 4272657 | 17589.9 |
| hnh endonuclease | BST45_19865 | Not Available | Negative | 4272603 - 4273130 | 19361.6 |
| wxg100 family type vii secretion target | BST45_19870 | Not Available | Negative | 4273148 - 4273266 | 4142.8 |
| hypothetical protein | BST45_19875 | Not Available | Negative | 4273360 - 4274481 | 37753.9 |
| pe family protein | BST45_19880 | Not Available | Negative | 4274515 - 4274811 | 9781.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


