Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esx-1 secretion-associated protein | BST45_19290 | Not Available | Negative | 4155599 - 4155910 | 10583.6 |
| secretion protein espe | BST45_19295 | Not Available | Negative | 4155995 - 4157251 | 43964.6 |
| hypothetical protein | BST45_19300 | Not Available | Negative | 4157497 - 4158615 | 39271.2 |
| vapc toxin family pin domain ribonuclease | BST45_19305 | Not Available | Negative | 4159017 - 4159430 | 15118.3 |
| hypothetical protein | BST45_19310 | Not Available | Negative | 4159421 - 4159648 | 8252.69 |
| hypothetical protein | BST45_19315 | Not Available | Negative | 4159785 - 4160114 | 11689.6 |
| hypothetical protein | BST45_19320 | Not Available | Positive | 4160660 - 4160950 | 9841.84 |
| hypothetical protein | BST45_19325 | Not Available | Negative | 4160970 - 4161164 | 6086.35 |
| hypothetical protein | BST45_19330 | Not Available | Negative | 4161272 - 4162447 | 41788.7 |
| hypothetical protein | BST45_19335 | Not Available | Negative | 4162675 - 4162980 | 10805.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


