Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_18445 | Not Available | Negative | 3956969 - 3957283 | 10597.4 |
| type vii secretion protein eccc | BST45_18450 | Not Available | Negative | 3957286 - 3961482 | 154062.0 |
| type vii secretion protein eccb | BST45_18455 | Not Available | Negative | 3961483 - 3962970 | 51550.8 |
| transglycosylase | BST45_18460 | Not Available | Negative | 3962973 - 3963845 | 31239.0 |
| hypothetical protein | BST45_18465 | Not Available | Negative | 3964033 - 3964423 | 12589.2 |
| type vii secretion-associated serine protease mycosin | BST45_18470 | Not Available | Positive | 3964424 - 3965492 | 36258.0 |
| type vii secretion protein ecce | BST45_18475 | Not Available | Positive | 3965489 - 3967099 | 57122.1 |
| type vii secretion aaa-atpase ecca | BST45_18480 | Not Available | Positive | 3967124 - 3968962 | 67028.9 |
| type vii secretion-associated serine protease mycosin | BST45_18485 | Not Available | Positive | 3969117 - 3970454 | 44932.4 |
| type vii secretion protein ecce | BST45_18490 | Not Available | Positive | 3970462 - 3971850 | 50837.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


