Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is30 family transposase | BST45_01730 | Not Available | Negative | 372373 - 373749 | 50413.9 |
| dtdp-glucose 4,6-dehydratase | BST45_01735 | Not Available | Positive | 374047 - 375006 | 35202.6 |
| sam-dependent methyltransferase | BST45_01740 | Not Available | Negative | 375026 - 375583 | 20545.8 |
| dna polymerase iv | BST45_01745 | Not Available | Positive | 375642 - 377036 | 49712.4 |
| l-asparaginase | BST45_01750 | Not Available | Negative | 377001 - 377969 | 32990.6 |
| signal peptidase ii | BST45_01755 | Not Available | Positive | 378027 - 378617 | 20634.2 |
| rna pseudouridine synthase | BST45_01760 | Not Available | Positive | 378755 - 379666 | 32483.9 |
| sam-dependent methyltransferase | BST45_01765 | Not Available | Negative | 379674 - 380441 | 28403.0 |
| group 1 truncated hemoglobin | BST45_01770 | Not Available | Negative | 381137 - 381559 | 14759.6 |
| oxidoreductase | BST45_01775 | Not Available | Positive | 381782 - 382798 | 36661.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


