Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST45_17475 | Not Available | Positive | 3701144 - 3711163 | 330513.0 |
| hypothetical protein | BST45_17485 | Not Available | Positive | 3717766 - 3723700 | 196726.0 |
| crispr-associated endonuclease cas2 | BST45_17490 | Not Available | Negative | 3729134 - 3729436 | 11338.8 |
| crispr-associated endonuclease cas4/cas1 | BST45_17495 | Not Available | Negative | 3729433 - 3731028 | 57816.9 |
| hypothetical protein | BST45_17500 | Not Available | Negative | 3731025 - 3732050 | 37034.0 |
| type i-u crispr-associated helicase/endonuclease cas3 | BST45_17505 | Not Available | Negative | 3732047 - 3734866 | 102786.0 |
| type i-u crispr-associated protein cas5/cas6 | BST45_17510 | Not Available | Negative | 3734866 - 3736425 | 55111.6 |
| type i-u crispr-associated protein cas7 | BST45_17515 | Not Available | Negative | 3736430 - 3737635 | 42338.2 |
| prepilin peptidase | BST45_17520 | Not Available | Negative | 3738242 - 3738688 | 14646.6 |
| shikimate dehydrogenase | BST45_17525 | Not Available | Negative | 3738700 - 3739527 | 27904.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


