Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | BST45_01630 | Not Available | Negative | 340900 - 341292 | 13527.3 |
| 50s ribosomal protein l10 | BST45_01635 | Not Available | Negative | 341324 - 341893 | 19395.3 |
| sugar kinase | BST45_01640 | Not Available | Negative | 342191 - 343111 | 30525.0 |
| malonyl coa-acp transacylase | BST45_01645 | Not Available | Negative | 343117 - 343728 | 21888.0 |
| alpha-mannosidase | BST45_01650 | Not Available | Negative | 343725 - 347906 | 149805.0 |
| hypothetical protein | BST45_01655 | Not Available | Positive | 348311 - 348847 | 19669.5 |
| pe-pgrs family protein | BST45_01660 | Not Available | Negative | 348844 - 350622 | 46197.1 |
| hypothetical protein | BST45_01665 | Not Available | Negative | 350623 - 351359 | 26263.7 |
| acyltransferase | BST45_01670 | Not Available | Negative | 351932 - 353263 | 49042.4 |
| polyketide synthase | BST45_01675 | Not Available | Negative | 353445 - 359717 | 222859.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


