Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vapc toxin family pin domain ribonuclease | BST45_16545 | Not Available | Negative | 3503862 - 3504269 | 14531.2 |
| hypothetical protein | BST45_16550 | Not Available | Negative | 3504266 - 3504499 | 8258.93 |
| hypothetical protein | BST45_16555 | Not Available | Negative | 3504554 - 3505321 | 26509.9 |
| methylmalonyl-coa mutase small subunit | BST45_16560 | Not Available | Positive | 3505514 - 3507394 | 65511.8 |
| methylmalonyl-coa mutase | BST45_16565 | Not Available | Positive | 3507400 - 3509664 | 80652.8 |
| hypothetical protein | BST45_16570 | Not Available | Positive | 3509776 - 3511032 | 46329.8 |
| atpase/protein kinase | BST45_16575 | Not Available | Positive | 3511103 - 3512092 | 35437.7 |
| esterase | BST45_16580 | Not Available | Positive | 3512156 - 3513442 | 45673.2 |
| dodecin family protein | BST45_16585 | Not Available | Negative | 3513452 - 3513664 | 7582.07 |
| polysaccharide biosynthesis protein gtra | BST45_16590 | Not Available | Negative | 3514045 - 3514536 | 18079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


