Mycobacterium shinjukuense strain CCUG 53584

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shinjukuense strain CCUG 53584 is a notable species within the genus Mycobacterium, characterized by the presence of flagella, which is relatively uncommon among mycobacteria. This trait may confer motility advantages under certain environmental conditions, potentially aiding in its adaptability and survival. The strain has a single replicon, indicating a streamlined genome organization typical of many prokaryotic organisms. The genome is accessible through the accession number MVIK00000000.1, facilitating further genetic and genomic studies that could enhance our understanding of its biology. In terms of ecological insights, the presence of flagella in Mycobacterium shinjukuense may suggest a specific ecological niche where motility provides selective advantages, such as in biofilms or within host organisms. This capability could influence its interactions with other microorganisms and its role in microbial communities. Overall, the unique traits of Mycobacterium shinjukuense strain CCUG 53584, particularly its flagellar motility, position it as a subject of interest for further research into microbial behavior, ecology, and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shinjukuense
Strainstrain CCUG 53584

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shinjukuense strain CCUG 53584


Gene Summary

Adenine Count

711929 bp

Thymine Count

709973 bp

Guanine Count

1491976 bp

Cytosine Count

1496018 bp

Genome Length

4409896 bp

Protein-coding Genes

3834 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna alkylation response proteinBST45_01580Not AvailableNegative322926 - 32455759064.6
polyhydroxybutyrate depolymeraseBST45_01585Not AvailableNegative324623 - 32546829730.6
deoxyribonuclease ivBST45_01590Not AvailableNegative325523 - 32628126850.6
alkaline ceramidaseBST45_01595Not AvailablePositive326457 - 32835868988.6
hypothetical proteinBST45_01600Not AvailableNegative328451 - 32933232329.8
dna-directed rna polymerase subunit beta'BST45_01605Not AvailableNegative329458 - 333408147069.0
dna-directed rna polymerase subunit betaBST45_01610Not AvailableNegative333449 - 336985129776.0
abc transporter atp-binding proteinBST45_01615Not AvailableNegative337455 - 33846536674.6
carotenoid oxygenaseBST45_01620Not AvailableNegative338614 - 34011955067.3
tetr family transcriptional regulatorBST45_01625Not AvailablePositive340182 - 34090725292.3

Displaying genes 301 – 310 of 3885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.