Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation response protein | BST45_01580 | Not Available | Negative | 322926 - 324557 | 59064.6 |
| polyhydroxybutyrate depolymerase | BST45_01585 | Not Available | Negative | 324623 - 325468 | 29730.6 |
| deoxyribonuclease iv | BST45_01590 | Not Available | Negative | 325523 - 326281 | 26850.6 |
| alkaline ceramidase | BST45_01595 | Not Available | Positive | 326457 - 328358 | 68988.6 |
| hypothetical protein | BST45_01600 | Not Available | Negative | 328451 - 329332 | 32329.8 |
| dna-directed rna polymerase subunit beta' | BST45_01605 | Not Available | Negative | 329458 - 333408 | 147069.0 |
| dna-directed rna polymerase subunit beta | BST45_01610 | Not Available | Negative | 333449 - 336985 | 129776.0 |
| abc transporter atp-binding protein | BST45_01615 | Not Available | Negative | 337455 - 338465 | 36674.6 |
| carotenoid oxygenase | BST45_01620 | Not Available | Negative | 338614 - 340119 | 55067.3 |
| tetr family transcriptional regulator | BST45_01625 | Not Available | Positive | 340182 - 340907 | 25292.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


