Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein lsr2 | BST45_15495 | Not Available | Negative | 3291536 - 3291874 | 12023.1 |
| lysine--trna ligase | BST45_15500 | Not Available | Negative | 3291985 - 3293499 | 55820.3 |
| pantothenate kinase | BST45_15505 | Not Available | Negative | 3293638 - 3294450 | 29021.0 |
| aspartate 1-decarboxylase | BST45_15510 | Not Available | Negative | 3294453 - 3294896 | 15931.1 |
| pantoate--beta-alanine ligase | BST45_15515 | Not Available | Negative | 3294896 - 3295831 | 32456.0 |
| oxidoreductase | BST45_15520 | Not Available | Negative | 3295828 - 3296739 | 31065.5 |
| hypothetical protein | BST45_15525 | Not Available | Negative | 3296836 - 3298104 | 45685.7 |
| hypothetical protein | BST45_15530 | Not Available | Negative | 3298270 - 3298746 | 16872.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BST45_15535 | Not Available | Negative | 3298746 - 3299282 | 19350.2 |
| dihydroneopterin aldolase | BST45_15540 | Not Available | Negative | 3299407 - 3299805 | 14409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


