Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | BST45_15050 | Not Available | Negative | 3194342 - 3196285 | 69753.8 |
| atp-dependent dna ligase | BST45_15055 | Not Available | Negative | 3196282 - 3198558 | 84190.6 |
| transcriptional regulator | BST45_15070 | Not Available | Negative | 3199349 - 3200137 | 29158.9 |
| ring-hydroxylating oxygenase subunit alpha | BST45_15075 | Not Available | Positive | 3200174 - 3201394 | 45446.8 |
| hypothetical protein | BST45_15080 | Not Available | Negative | 3201463 - 3202023 | 19713.5 |
| polysaccharide deacetylase | BST45_15085 | Not Available | Negative | 3202172 - 3202972 | 28749.3 |
| luciferase | BST45_15090 | Not Available | Negative | 3203186 - 3204193 | 36828.1 |
| abc transporter | BST45_15110 | Not Available | Negative | 3205889 - 3206308 | 14692.6 |
| hypothetical protein | BST45_15115 | Not Available | Negative | 3206327 - 3206596 | 9577.7 |
| alkylhydroperoxidase | BST45_15120 | Not Available | Positive | 3206685 - 3207059 | 13087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


