Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shinjukuense |
| Strain | strain CCUG 53584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
711929 bp
Thymine Count
709973 bp
Guanine Count
1491976 bp
Cytosine Count
1496018 bp
Genome Length
4409896 bp
Protein-coding Genes
3834 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apocarotenoid-15,15'-oxygenase | BST45_14830 | Not Available | Negative | 3147040 - 3148548 | 56626.1 |
| acetyl-coa acetyltransferase | BST45_14835 | Not Available | Negative | 3148550 - 3149776 | 42947.5 |
| hypothetical protein | BST45_14840 | Not Available | Negative | 3149811 - 3151073 | 40896.0 |
| pe family protein | BST45_14845 | Not Available | Negative | 3151087 - 3151386 | 9691.41 |
| Trna-arg | Not Available | Not Available | Positive | 3154283 - 3154358 | Not Available |
| hypothetical protein | BST45_14860 | Not Available | Negative | 3154575 - 3155147 | 21640.0 |
| twitching motility protein pilt | BST45_14870 | Not Available | Negative | 3155643 - 3156053 | 15168.0 |
| hypothetical protein | BST45_14875 | Not Available | Negative | 3156056 - 3156295 | 8857.67 |
| f420-dependent oxidoreductase | BST45_14880 | Not Available | Negative | 3156339 - 3157157 | 29578.5 |
| divalent metal cation transporter | BST45_14890 | Not Available | Negative | 3157909 - 3159135 | 42478.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


