Mycobacterium shinjukuense strain CCUG 53584

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shinjukuense strain CCUG 53584 is a notable species within the genus Mycobacterium, characterized by the presence of flagella, which is relatively uncommon among mycobacteria. This trait may confer motility advantages under certain environmental conditions, potentially aiding in its adaptability and survival. The strain has a single replicon, indicating a streamlined genome organization typical of many prokaryotic organisms. The genome is accessible through the accession number MVIK00000000.1, facilitating further genetic and genomic studies that could enhance our understanding of its biology. In terms of ecological insights, the presence of flagella in Mycobacterium shinjukuense may suggest a specific ecological niche where motility provides selective advantages, such as in biofilms or within host organisms. This capability could influence its interactions with other microorganisms and its role in microbial communities. Overall, the unique traits of Mycobacterium shinjukuense strain CCUG 53584, particularly its flagellar motility, position it as a subject of interest for further research into microbial behavior, ecology, and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shinjukuense
Strainstrain CCUG 53584

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shinjukuense strain CCUG 53584

Gene Summary

Adenine Count

711929 bp

Thymine Count

709973 bp

Guanine Count

1491976 bp

Cytosine Count

1496018 bp

Genome Length

4409896 bp

Protein-coding Genes

3834 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
apocarotenoid-15,15'-oxygenaseBST45_14830Not AvailableNegative3147040 - 314854856626.1
acetyl-coa acetyltransferaseBST45_14835Not AvailableNegative3148550 - 314977642947.5
hypothetical proteinBST45_14840Not AvailableNegative3149811 - 315107340896.0
pe family proteinBST45_14845Not AvailableNegative3151087 - 31513869691.41
Trna-argNot AvailableNot AvailablePositive3154283 - 3154358Not Available
hypothetical proteinBST45_14860Not AvailableNegative3154575 - 315514721640.0
twitching motility protein piltBST45_14870Not AvailableNegative3155643 - 315605315168.0
hypothetical proteinBST45_14875Not AvailableNegative3156056 - 31562958857.67
f420-dependent oxidoreductaseBST45_14880Not AvailableNegative3156339 - 315715729578.5
divalent metal cation transporterBST45_14890Not AvailableNegative3157909 - 315913542478.2

Displaying genes 2821 – 2830 of 3885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.